Publications

Publications


Kuske CR, Hesse CN, Challacombe JF, Cullen D, Herr JR, Mueller RC, Tsang A, Vilgalys R. 2015. Prospects and challenges for fungal metatranscriptomics of complex communities Fungal Ecology 14: 133–137 Link / PDF

Herr JR, Öpik M, Hibbett DS. 2015. Towards the unification of sequence-based classification and sequence-based identification of host-associated microorganisms New Phytologist 205(1): 27-31 Link / PDF / and see companion report from Kennedy & Stajich for some discussion of my work.


Tisserant E, M Malbreil, A Kuo, A Kohler, A Symeonidi, R Balestrini, P Charron, N Duensing, N Frei, V Gianinazzi-Pearson, LB Gilbert, Y Handa, JR Herr, M Hijri, R Koul, M Kawaguchi, F Krajinski, PJ Lammers, FG Masclaux, C Murat, E Morin, S Ndikumana, M Pagni, D Petitpierre, N Requena, P Rosikiewicz, R Riley, K Saito, H San Clemente, H Shapiro, D Van Tuinen, G Bécard, P Bonfante, U Paszkowski, YY Shachar-Hill, GA Tuskan, JPW Young, IR Sanders, B Henrissat, SA Rensing, IV Grigoriev, N Corradi, C Roux, F Martin. (2013) Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis Proceedings of the National Academy of Sciences 110 (50), 20117-20122. Link / PDF

Herr JR, JE Carlson (2013) Traditional Breeding, Genomics-Assisted Breeding, and Biotechnological Modification of Forest Trees and Short Rotation Woody Crops Wood-Based Energy in the Northern Forests , Pages: 69-89 Link / PDF

Scully ED, SM Geib, K Hoover, M Tien, SG Tringe, KW Barry, T Glavina del Rio, M Chovatia, JR Herr, JE Carlson (2013) Metagenomic profiling reveals lignocellulose degrading system in a microbial community associated with a wood-feeding beetle PloS one, 8 (9), e73827 Link / PDF


Herr JR (2012) Cryptococcus: From Human Pathogen To Model Yeast Inoculum 63(2): 22 Link / PDF


Herr, JR (2011) Bioenergy from trees New Phytologist 192 (2), 313-315. Link / PDF

Barakat A, NBM Yassin, JS Park, A Choi, JR Herr, JE Carlson (2011) Comparative and phylogenomic analyses of cinnamoyl-CoA reductase and cinnamoyl-CoA-reductase-like gene family in land plants Plant Science 181 (3), 249-257. Link / PDF


Koide RT, JN Sharda, JR Herr, GM Malcolm (2008) Ectomycorrhizal fungi and the biotrophy–saprotrophy continuum New Phytologist 178 (2), 230-233. Link / PDF.